1
Eduction in their synthesis remains to be determined. b) Strain differences at 24 hr after infection Extending the analysis to mice infected 24 hr earlier we gained some additional insight into the response pattern. Three gen-Ali et al. Proteome Science 2010, 8:34 http://www.proteomesci.com/content/8/1/Page 10 ofTable 2: Changes in protein expression between wild-type and SP-A-/- mice for control,
1
Eduction in their synthesis remains to be determined. b) Strain differences at 24 hr after infection Extending the analysis to mice infected 24 hr earlier we gained some additional insight into the response pattern. Three gen-Ali et al. Proteome Science 2010, 8:34 http://www.proteomesci.com/content/8/1/Page 10 ofTable 2: Changes in protein expression between wild-type and SP-A-/- mice for control,
1
N of a -sheet using strands from the two monomers. As expected, CS-Rosetta calculations of the individual monomers failed to converge (Figure 5A); the native state cannot be energetically distinguished by considering only interactions within the monomer. If nevertheless the low energy, partially unfolded monomers are used as starting points in the symmetric docking protocol we obtain a converged s
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Ntrol, 4 hr post infection and 24 hr post infection: percent changes with significance for all identified proteins corresponding to reference gels in Fig. 2 (Continued)33 34 35 36 37 38 39 40 Glutathione S-transferase, alpha 3 Glutathione S-transferase, alpha 4 Glutathione S-transferase, mu 1 Glutathione S-transferase, omega 1 (Similar to) Glutathione S-transferase, Ya chain (GST class-alpha) (Ya1
1
Eduction in their synthesis remains to be determined. b) Strain differences at 24 hr after infection Extending the analysis to mice infected 24 hr earlier we gained some additional insight into the response pattern. Three gen-Ali et al. Proteome Science 2010, 8:34 http://www.proteomesci.com/content/8/1/Page 10 ofTable 2: Changes in protein expression between wild-type and SP-A-/- mice for control,
1
Ntrol, 4 hr post infection and 24 hr post infection: percent changes with significance for all identified proteins corresponding to reference gels in Fig. 2 (Continued)33 34 35 36 37 38 39 40 Glutathione S-transferase, alpha 3 Glutathione S-transferase, alpha 4 Glutathione S-transferase, mu 1 Glutathione S-transferase, omega 1 (Similar to) Glutathione S-transferase, Ya chain (GST class-alpha) (Ya1
1
Hemoglobin subunit alpha (Hemoglobin alpha chain) (Alpha-globin) Keratin complex 1, acidic, gene 10 Kpnb1 protein b Lactate dehydrogenase 2, B chain Murinoglobulin-1 presursor (MuG1) Myosin heavy chain IIB Peroxiredoxin 1 Prothrombin precursor (Ec 3.4.21.5) (Coagulation factor II) Pulmonary surfactant associated protein A precursor (SP-A) (PSP-A) (PSAP) Rho GDP dissociation inhibitor (GDI) alpha S
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Han WT mice both at baseline (-23.3 ) and after 4 hr of infection (-89.53 ), but by the 24 hour time point its levels weremarkedly higher in the SP-A-/- mice (93.8 ), indicating a delayed response in the SP-A-/- mice. c) Potential pathways affected by changes We also used the Ingenuity Systems Pathways Analysis program to better understand the functional implications of the absence of SP-A, both u

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